GCC Code Coverage Report

Directory: ./
File: src/iguana/algorithms/Algorithm.cc
Date: 2025-11-25 17:57:04
Coverage Exec Excl Total
Lines: 60.3% 202 0 335
Functions: 48.8% 39 0 80
Branches: 34.3% 181 0 527
Line Branch Exec Source
1 #include "Algorithm.h"
2
3 namespace iguana {
4
5 211 hipo::banklist::size_type tools::GetBankIndex(
6 hipo::banklist& banks,
7 std::string const& bank_name,
8 unsigned int const& variant) noexcept(false)
9 {
10 unsigned int num_found = 0;
11
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 1434 for(hipo::banklist::size_type i = 0; i < banks.size(); i++) {
12 717 auto& bank = banks.at(i);
13
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 1434 if(bank.getSchema().getName() == bank_name) {
14
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 218 if(num_found == variant)
15 211 return i;
16 7 num_found++;
17 }
18 }
19 ✗ throw std::runtime_error("GetBankIndex failed to find bank \"" + bank_name + "\"");
20 }
21
22 ///////////////////////////////////////////////////////////////////////////////
23
24 15 void Algorithm::Start()
25 {
26
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 15 m_rows_only = true;
27 hipo::banklist no_banks = {};
28
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 15 Start(no_banks);
29 15 }
30
31 ///////////////////////////////////////////////////////////////////////////////
32
33 template <typename OPTION_TYPE>
34 140 OPTION_TYPE Algorithm::GetOptionScalar(std::string const& key, YAMLReader::node_path_t node_path) const
35 {
36 140 CompleteOptionNodePath(key, node_path);
37 140 auto opt = GetCachedOption<OPTION_TYPE>(key);
38
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 140 if(!opt.has_value()) {
39
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 226 opt = m_yaml_config->GetScalar<OPTION_TYPE>(node_path);
40 }
41
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 139 if(!opt.has_value()) {
42
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 2 m_log->Error("Failed to `GetOptionScalar` for key {:?}", key);
43
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 2 throw std::runtime_error("config file parsing issue");
44 }
45
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std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > iguana::Algorithm::GetOptionScalar<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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double iguana::Algorithm::GetOptionScalar<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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int iguana::Algorithm::GetOptionScalar<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 137 PrintOptionValue(key, opt.value());
46 137 return opt.value();
47 }
48 template int Algorithm::GetOptionScalar(std::string const& key, YAMLReader::node_path_t node_path) const;
49 template double Algorithm::GetOptionScalar(std::string const& key, YAMLReader::node_path_t node_path) const;
50 template std::string Algorithm::GetOptionScalar(std::string const& key, YAMLReader::node_path_t node_path) const;
51
52 ///////////////////////////////////////////////////////////////////////////////
53
54 template <typename OPTION_TYPE>
55 55 std::vector<OPTION_TYPE> Algorithm::GetOptionVector(std::string const& key, YAMLReader::node_path_t node_path) const
56 {
57 55 CompleteOptionNodePath(key, node_path);
58 55 auto opt = GetCachedOption<std::vector<OPTION_TYPE>>(key);
59
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 55 if(!opt.has_value()) {
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 90 opt = m_yaml_config->GetVector<OPTION_TYPE>(node_path);
61 }
62
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 55 if(!opt.has_value()) {
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 4 m_log->Error("Failed to `GetOptionVector` for key {:?}", key);
64
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 4 throw std::runtime_error("config file parsing issue");
65 }
66
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 55 PrintOptionValue(key, opt.value());
67
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std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionVector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<double, std::allocator<double> > iguana::Algorithm::GetOptionVector<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::vector<int, std::allocator<int> > iguana::Algorithm::GetOptionVector<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 102 return opt.value();
68 }
69 template std::vector<int> Algorithm::GetOptionVector(std::string const& key, YAMLReader::node_path_t node_path) const;
70 template std::vector<double> Algorithm::GetOptionVector(std::string const& key, YAMLReader::node_path_t node_path) const;
71 template std::vector<std::string> Algorithm::GetOptionVector(std::string const& key, YAMLReader::node_path_t node_path) const;
72
73 ///////////////////////////////////////////////////////////////////////////////
74
75 template <typename OPTION_TYPE>
76 17 std::set<OPTION_TYPE> Algorithm::GetOptionSet(std::string const& key, YAMLReader::node_path_t node_path) const
77 {
78
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std::set<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > iguana::Algorithm::GetOptionSet<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::set<double, std::less<double>, std::allocator<double> > iguana::Algorithm::GetOptionSet<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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std::set<int, std::less<int>, std::allocator<int> > iguana::Algorithm::GetOptionSet<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::deque<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> >, std::allocator<std::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::function<YAML::Node (YAML::Node)> > > >) const:
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 17 auto val_vec = GetOptionVector<OPTION_TYPE>(key, node_path);
79 std::set<OPTION_TYPE> val_set;
80 std::copy(val_vec.begin(), val_vec.end(), std::inserter(val_set, val_set.end()));
81 15 return val_set;
82 1 }
83 template std::set<int> Algorithm::GetOptionSet(std::string const& key, YAMLReader::node_path_t node_path) const;
84 template std::set<double> Algorithm::GetOptionSet(std::string const& key, YAMLReader::node_path_t node_path) const;
85 template std::set<std::string> Algorithm::GetOptionSet(std::string const& key, YAMLReader::node_path_t node_path) const;
86
87 ///////////////////////////////////////////////////////////////////////////////
88
89 126 void Algorithm::SetName(std::string_view name)
90 {
91 126 Object::SetName(name);
92
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 126 if(m_yaml_config)
93 ✗ m_yaml_config->SetName("config|" + m_name);
94 126 }
95
96 ///////////////////////////////////////////////////////////////////////////////
97
98 42 std::unique_ptr<YAMLReader> const& Algorithm::GetConfig() const
99 {
100 42 return m_yaml_config;
101 }
102
103 ///////////////////////////////////////////////////////////////////////////////
104
105 ✗ void Algorithm::SetConfig(std::unique_ptr<YAMLReader>&& yaml_config)
106 {
107 m_yaml_config = std::move(yaml_config);
108 ✗ }
109
110 ///////////////////////////////////////////////////////////////////////////////
111
112
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 6 void Algorithm::SetConfigFile(std::string const& name)
113 {
114
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 12 o_user_config_file = SetOption("config_file", name);
115 6 }
116
117 ///////////////////////////////////////////////////////////////////////////////
118
119
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 6 void Algorithm::SetConfigDirectory(std::string const& name)
120 {
121
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 12 o_user_config_dir = SetOption("config_dir", name);
122 6 }
123
124 ///////////////////////////////////////////////////////////////////////////////
125
126
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 47 void Algorithm::ParseYAMLConfig()
127 {
128
129 // start YAMLReader instance, if not yet started
130
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 47 if(!m_yaml_config) {
131 // set config files and directories specified by `::SetConfigFile`, `::SetConfigDirectory`, etc.
132
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 47 o_user_config_file = GetCachedOption<std::string>("config_file").value_or("");
133
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 94 o_user_config_dir = GetCachedOption<std::string>("config_dir").value_or("");
134 47 m_log->Debug("Instantiating `YAMLReader`");
135
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 94 m_yaml_config = std::make_unique<YAMLReader>("config|" + m_name);
136 47 m_yaml_config->SetLogLevel(m_log->GetLevel()); // synchronize log levels
137 47 m_yaml_config->AddDirectory(o_user_config_dir);
138 47 m_yaml_config->AddFile(m_default_config_file);
139 47 m_yaml_config->AddFile(o_user_config_file);
140 }
141 else
142 ✗ m_log->Debug("`YAMLReader` already instantiated for this algorithm; using that");
143
144 // parse the files
145 47 m_yaml_config->LoadFiles();
146
147 // if "log" was not set by `SetOption` (i.e., not in `m_option_cache`)
148 // - NB: not using `GetCachedOption<T>` here, since `T` can be a few different types for key=='log'
149
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 94 if(m_option_cache.find("log") == m_option_cache.end()) {
150 // check if 'log' is set in the YAML node for this algorithm
151
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 75 auto log_level_from_yaml = m_yaml_config->GetScalar<std::string>({m_class_name, "log"});
152
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 25 if(log_level_from_yaml) {
153
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 3 m_log->SetLevel(log_level_from_yaml.value());
154
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 6 m_yaml_config->SetLogLevel(log_level_from_yaml.value());
155 }
156 }
157
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 47 }
158
159 ///////////////////////////////////////////////////////////////////////////////
160
161 8 void Algorithm::StartRCDBReader()
162 {
163
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 24 m_rcdb = std::make_unique<RCDBReader>("RCDB|" + GetName(), m_log->GetLevel());
164 8 }
165
166 ///////////////////////////////////////////////////////////////////////////////
167
168 206 hipo::banklist::size_type Algorithm::GetBankIndex(hipo::banklist& banks, std::string const& bank_name) const
169 {
170
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 206 if(m_rows_only)
171 return 0;
172 try {
173 // check if this bank was created by iguana
174 175 auto created_by_iguana = AlgorithmFactory::GetCreatorAlgorithms(bank_name);
175 // get the index
176 175 auto idx = tools::GetBankIndex(
177 banks,
178 bank_name,
179
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 175 created_by_iguana ? m_created_bank_variant : 0);
180
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 350 m_log->Debug("cached index of bank '{}' is {}", bank_name, idx);
181 return idx;
182 }
183 ✗ catch(std::runtime_error const& ex) {
184 ✗ m_log->Error("required input bank '{}' not found; cannot `Start` algorithm '{}'", bank_name, m_class_name);
185 ✗ auto creators = AlgorithmFactory::GetCreatorAlgorithms(bank_name);
186 ✗ if(creators)
187 ✗ m_log->Error(" -> this bank is created by algorithm(s) [{}]; please `Start` ONE of them BEFORE this algorithm", fmt::join(creators.value(), ", "));
188 ✗ throw std::runtime_error("cannot cache bank index");
189 ✗ }
190 }
191
192 ///////////////////////////////////////////////////////////////////////////////
193
194 3 hipo::banklist::size_type Algorithm::GetCreatedBankIndex(hipo::banklist& banks) const noexcept(false)
195 {
196
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 6 return GetBankIndex(banks, GetCreatedBankName());
197 }
198
199 ///////////////////////////////////////////////////////////////////////////////
200
201
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 27 void Algorithm::PrintOptionValue(std::string const& key, int const& val, Logger::Level const level, std::string_view prefix) const
202 {
203
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 54 m_log->Print(level, "{}: {:>20} = {} [int]", prefix, key, val);
204 27 }
205
206
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 22 void Algorithm::PrintOptionValue(std::string const& key, double const& val, Logger::Level const level, std::string_view prefix) const
207 {
208
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 44 m_log->Print(level, "{}: {:>20} = {} [double]", prefix, key, val);
209 22 }
210
211
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 88 void Algorithm::PrintOptionValue(std::string const& key, std::string const& val, Logger::Level const level, std::string_view prefix) const
212 {
213
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 176 m_log->Print(level, "{}: {:>20} = {:?} [string]", prefix, key, val);
214 88 }
215
216
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 18 void Algorithm::PrintOptionValue(std::string const& key, std::vector<int> const& val, Logger::Level const level, std::string_view prefix) const
217 {
218
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 18 m_log->Print(level, "{}: {:>20} = ({}) [std::vector<int>]", prefix, key, fmt::join(val, ", "));
219 18 }
220
221
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 28 void Algorithm::PrintOptionValue(std::string const& key, std::vector<double> const& val, Logger::Level const level, std::string_view prefix) const
222 {
223
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 28 m_log->Print(level, "{}: {:>20} = ({}) [std::vector<double>]", prefix, key, fmt::join(val, ", "));
224 28 }
225
226 5 void Algorithm::PrintOptionValue(std::string const& key, std::vector<std::string> const& val, Logger::Level const level, std::string_view prefix) const
227 {
228 std::vector<std::string> val_quoted;
229
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 17 for(auto const& s : val)
230
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 24 val_quoted.push_back(fmt::format("{:?}", s));
231
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 5 m_log->Print(level, "{}: {:>20} = ({}) [std::vector<string>]", prefix, key, fmt::join(val_quoted, ", "));
232 5 }
233
234 ///////////////////////////////////////////////////////////////////////////////
235
236 124337 hipo::bank& Algorithm::GetBank(hipo::banklist& banks, hipo::banklist::size_type const idx, std::string const& expected_bank_name) const
237 {
238
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 124337 if(m_rows_only) {
239 ✗ m_log->Error("algorithm is in 'rows only' mode; cannot call `Run` since banks are not cached; use action function(s) instead");
240 }
241 else {
242 try {
243
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 124337 auto& result = banks.at(idx);
244
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 371247 if(!expected_bank_name.empty() && result.getSchema().getName() != expected_bank_name)
245 ✗ m_log->Error("expected input bank '{}' at index={}; got bank named '{}'", expected_bank_name, idx, result.getSchema().getName());
246 else
247 124337 return result;
248 }
249 ✗ catch(std::out_of_range const& o) {
250 ✗ m_log->Error("required input bank '{}' not found; cannot `Run` algorithm '{}'", expected_bank_name, m_class_name);
251 ✗ auto creators = AlgorithmFactory::GetCreatorAlgorithms(expected_bank_name);
252 ✗ if(creators)
253 ✗ m_log->Error(" -> this bank is created by algorithm(s) [{}]; please `Run` ONE of them BEFORE this algorithm", fmt::join(creators.value(), ", "));
254 ✗ }
255 }
256 ✗ throw std::runtime_error("GetBank failed");
257 }
258
259 ///////////////////////////////////////////////////////////////////////////////
260
261 23 std::vector<std::string> Algorithm::GetCreatedBankNames() const noexcept(false)
262 {
263 23 auto created_banks = AlgorithmFactory::GetCreatedBanks(m_class_name);
264
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 23 if(created_banks)
265
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 46 return created_banks.value();
266 ✗ throw std::runtime_error("failed to get created bank names");
267 }
268
269 ///////////////////////////////////////////////////////////////////////////////
270
271 23 std::string Algorithm::GetCreatedBankName() const noexcept(false)
272 {
273 23 auto created_banks = GetCreatedBankNames();
274
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 23 switch(created_banks.size()) {
275 ✗ case 0:
276 ✗ m_log->Error("algorithm {:?} creates no new banks", m_class_name);
277 ✗ break;
278 23 case 1:
279
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 46 return created_banks.at(0);
280 break;
281 ✗ default:
282 ✗ m_log->Error("algorithm {:?} creates more than one bank; they are: [{}]", m_class_name, fmt::join(created_banks, ", "));
283 ✗ m_log->Error("- if you called `GetCreatedBank` or `GetCreatedBankSchema`, please specify which bank you want");
284 ✗ m_log->Error("- if you called `GetCreatedBankName`, call `GetCreatedBankNames` instead");
285 ✗ break;
286 }
287 ✗ throw std::runtime_error("failed to get created bank names");
288 23 }
289
290 ///////////////////////////////////////////////////////////////////////////////
291
292 1 hipo::bank Algorithm::GetCreatedBank(std::string const& bank_name) const noexcept(false)
293 {
294
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 1 return hipo::bank(GetCreatedBankSchema(bank_name), 0);
295 }
296
297 ///////////////////////////////////////////////////////////////////////////////
298
299
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 32 hipo::schema Algorithm::GetCreatedBankSchema(std::string const& bank_name) const noexcept(false)
300 {
301 std::string bank_name_arg = bank_name; // copy, to permit modification
302
303 // if the user did not provide a bank name, get it from the list of banks created by the algorithm;
304 // this will fail if the algorithm creates more than one bank, in which case, the user must
305 // specify the bank name explicitly
306
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 32 if(bank_name.empty())
307
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 2 bank_name_arg = GetCreatedBankName();
308
309 // loop over bank definitions, `BANK_DEFS`, which is generated at build-time using `src/iguana/bankdefs/iguana.json`
310
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 103 for(auto const& bank_def : BANK_DEFS) {
311
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 103 if(bank_def.name == bank_name_arg) {
312 // make sure the new bank is in REGISTER_IGUANA_ALGORITHM
313
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 64 if(!AlgorithmFactory::GetCreatorAlgorithms(bank_name_arg)) {
314 ✗ m_log->Error("algorithm {:?} creates bank {:?}, which is not registered; new banks must be included in `REGISTER_IGUANA_ALGORITHM` arguments", m_class_name, bank_name_arg);
315 ✗ throw std::runtime_error("CreateBank failed");
316 }
317 // create the schema format string
318 std::vector<std::string> schema_def;
319
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 325 for(auto const& entry : bank_def.entries)
320
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 586 schema_def.push_back(entry.name + "/" + entry.type);
321 32 auto format_string = fmt::format("{}", fmt::join(schema_def, ","));
322 // create the new bank schema
323
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 32 hipo::schema bank_schema(bank_name_arg.c_str(), bank_def.group, bank_def.item);
324
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 32 bank_schema.parse(format_string);
325 32 return bank_schema;
326 32 }
327 }
328
329 ✗ throw std::runtime_error(fmt::format("bank {:?} not found in 'BankDefs.h'; is this bank defined in src/iguana/bankdefs/iguana.json ?", bank_name_arg));
330 }
331 ///////////////////////////////////////////////////////////////////////////////
332
333 12 unsigned int Algorithm::GetCreatedBankVariant() const
334 {
335 12 return m_created_bank_variant;
336 }
337
338 ///////////////////////////////////////////////////////////////////////////////
339
340 ✗ std::unique_ptr<RCDBReader>& Algorithm::GetRCDBReader()
341 {
342 ✗ return m_rcdb;
343 }
344
345 ///////////////////////////////////////////////////////////////////////////////
346
347 31 hipo::schema Algorithm::CreateBank(
348 hipo::banklist& banks,
349 hipo::banklist::size_type& bank_idx,
350 std::string const& bank_name) noexcept(false)
351 {
352 // check if this bank is already present in `banks`, and set `m_created_bank_variant` accordingly
353
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 173 for(auto& bank : banks) {
354
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 284 if(bank.getSchema().getName() == bank_name)
355 1 m_created_bank_variant++;
356 }
357 // create the schema, and add the new bank to `banks`
358 31 auto bank_schema = GetCreatedBankSchema(bank_name);
359 31 bank_idx = banks.size();
360
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 31 banks.emplace_back(bank_schema, 0);
361 31 return bank_schema;
362 ✗ }
363
364 ///////////////////////////////////////////////////////////////////////////////
365
366 ✗ void Algorithm::ShowBanks(hipo::banklist const& banks, std::string_view message, Logger::Level const level) const
367 {
368 ✗ if(m_log->GetLevel() <= level) {
369 ✗ if(!message.empty())
370 ✗ m_log->Print(level, message);
371 ✗ for(auto& bank : banks)
372 ✗ bank.show();
373 }
374 ✗ }
375
376 ///////////////////////////////////////////////////////////////////////////////
377
378 73068 void Algorithm::ShowBank(hipo::bank const& bank, std::string_view message, Logger::Level const level) const
379 {
380
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 73068 if(m_log->GetLevel() <= level) {
381 ✗ if(!message.empty())
382 ✗ m_log->Print(level, message);
383 ✗ bank.show();
384 }
385 73068 }
386
387 ///////////////////////////////////////////////////////////////////////////////
388
389 template <typename OPTION_TYPE>
390 289 std::optional<OPTION_TYPE> Algorithm::GetCachedOption(std::string const& key) const
391 {
392
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std::optional<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > > iguana::Algorithm::GetCachedOption<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::vector<double, std::allocator<double> > > iguana::Algorithm::GetCachedOption<std::vector<double, std::allocator<double> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::vector<int, std::allocator<int> > > iguana::Algorithm::GetCachedOption<std::vector<int, std::allocator<int> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > iguana::Algorithm::GetCachedOption<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<double> iguana::Algorithm::GetCachedOption<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<int> iguana::Algorithm::GetCachedOption<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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 289 if(key == "")
393 ✗ return {};
394
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std::optional<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > > iguana::Algorithm::GetCachedOption<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::vector<double, std::allocator<double> > > iguana::Algorithm::GetCachedOption<std::vector<double, std::allocator<double> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::vector<int, std::allocator<int> > > iguana::Algorithm::GetCachedOption<std::vector<int, std::allocator<int> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > iguana::Algorithm::GetCachedOption<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<double> iguana::Algorithm::GetCachedOption<double>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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std::optional<int> iguana::Algorithm::GetCachedOption<int>(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const:
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 289 if(auto it{m_option_cache.find(key)}; it != m_option_cache.end()) {
395 try { // get the expected type
396 ✗ return std::get<OPTION_TYPE>(it->second);
397 }
398 ✗ catch(std::bad_variant_access const& ex) {
399 ✗ auto printer = [&key, this](auto const& v) {
400 ✗ m_log->Error("wrong type used in SetOption call for option {:?}; using its default value instead", key);
401 ✗ PrintOptionValue(key, v, Logger::Level::error, " USER");
402 ✗ if(m_log->GetLevel() > Logger::Level::debug)
403 ✗ m_log->Error("to see the actual option values used (and their types), set the log level to 'debug' or lower");
404 };
405 ✗ std::visit(printer, it->second);
406 }
407 }
408 266 return {};
409 }
410 template std::optional<int> Algorithm::GetCachedOption(std::string const& key) const;
411 template std::optional<double> Algorithm::GetCachedOption(std::string const& key) const;
412 template std::optional<std::string> Algorithm::GetCachedOption(std::string const& key) const;
413 template std::optional<std::vector<int>> Algorithm::GetCachedOption(std::string const& key) const;
414 template std::optional<std::vector<double>> Algorithm::GetCachedOption(std::string const& key) const;
415 template std::optional<std::vector<std::string>> Algorithm::GetCachedOption(std::string const& key) const;
416
417 ///////////////////////////////////////////////////////////////////////////////
418
419 ✗ void Algorithm::ThrowSinceRenamed(std::string const& new_name, std::string const& version) const noexcept(false)
420 {
421 std::string new_path = new_name;
422 std::string::size_type it = 0;
423 ✗ while((it = new_path.find("::", it)) != std::string::npos)
424 ✗ new_path.replace(it, 2, "/");
425 ✗ m_log->Error("As of Iguana version {}, the algorithm {:?} has been renamed:", version, m_class_name);
426 ✗ m_log->Error("- the new name is: {:?}", new_name);
427 ✗ m_log->Error("- the new C++ header is: \"iguana/algorithms/{}/Algorithm.h\"", new_path);
428 ✗ m_log->Error("- please update your code (and custom configuration YAML, if you have one)");
429 ✗ m_log->Error("- sorry for the inconvenience!");
430 ✗ throw std::runtime_error("algorithm has been renamed");
431 }
432
433 ///////////////////////////////////////////////////////////////////////////////
434
435
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 195 void Algorithm::CompleteOptionNodePath(std::string const& key, YAMLReader::node_path_t& node_path) const
436 {
437
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 195 if(node_path.empty())
438 106 node_path.push_front(key);
439 195 node_path.push_front(m_class_name);
440 195 }
441 }
442